Chinese Journal of Tropical Crops ›› 2019, Vol. 40 ›› Issue (12): 2456-2465.DOI: 10.3969/j.issn.1000-2561.2019.12.020
• Crop Pests, Diseases and Their Control, Environmental Protection • Previous Articles Next Articles
LI Boxun,FENG Yanli,LIU Xianbao,CAI Jimiao,LU Cuimei,ZHENG Xiaolan,HUANG Guixiu()
Received:
2019-03-15
Revised:
2019-05-13
Online:
2019-12-25
Published:
2019-12-20
Contact:
HUANG Guixiu
CLC Number:
LI Boxun,FENG Yanli,LIU Xianbao,CAI Jimiao,LU Cuimei,ZHENG Xiaolan,HUANG Guixiu. Genetic Diversity and Pathogenic Variability Among Isolates of Corynespora cassiicola from Tropical Crops in China[J]. Chinese Journal of Tropical Crops, 2019, 40(12): 2456-2465.
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URL: http://www.rdzwxb.com/EN/10.3969/j.issn.1000-2561.2019.12.020
菌株编号 Stains | 采集年 Year | 地理来源 Geographical origin | 寄主 Host | ITS登录号 GenBank | EF-1α登录号 GenBank | TUB登录号 GenBank | ||||
---|---|---|---|---|---|---|---|---|---|---|
HCcGX01 | 2007 | 中国广西省东兴市马路镇 | Hevea brasiliensis | MK571285 | MK589895 | MK589805 | ||||
CpCcHNDZ02 | 2007 | 中国海南省儋州市两院 | Carica papaya | MK571291 | MK589901 | MK589807 | ||||
CpCcYN02 | 2007 | 中国云南省西双版纳景洪农场 | Carica papaya | MK571295 | MK589905 | MK589809 | ||||
CpCcHN07 | 2007 | 中国海南省澄迈县红光农场 | Carica papaya | MK571297 | MK589907 | MK589810 | ||||
HCcYNMX1504 | 2013 | 中国云南省景洪市勐醒农场 | Hevea brasiliensis | MK571313 | MK589923 | MK589811 | ||||
HCcYNMX1501 | 2013 | 中国云南省景洪市勐醒农场 | Hevea brasiliensis | MK571314 | MK589924 | MK589812 | ||||
HCcYNRZS1506 | 2013 | 中国云南省景洪市热带作物研究所 | Hevea brasiliensis | MK571315 | MK589925 | MK589813 | ||||
CpCcYNMX1501 | 2013 | 中国云南省景洪市勐醒农场 | Carica papaya | MK571316 | MK589926 | MK589814 | ||||
HCcGDMM1402 | 2014 | 中国广东省化州市农垦热带作物科学研究所 | Hevea brasiliensis | MK571317 | MK589927 | MK589815 | ||||
VsCcHN10 | 2010 | 中国海南省三亚南繁科学技术研究院 | Vigna unguiculata | MK571324 | MK589934 | MK589816 | ||||
VsCcHN09 | 2010 | 中国海南省三亚南繁科学技术研究院 | Vigna unguiculata | MK571325 | MK589935 | MK589817 | ||||
CmCcHN03 | 2010 | 中国海南省三亚南繁科学技术研究院 | Cucumis melo | MK571328 | MK589938 | MK589818 | ||||
SmCcHN01 | 2010 | 中国海南省三亚南繁科学技术研究院 | Solanum melongena | MK571330 | MK589940 | MK589819 | ||||
LJCcHN01 | 2016 | 中国海南省三亚南繁科学技术研究院 | Capsicu mannuum | MK571331 | MK589941 | MK589820 | ||||
LJCcHN02 | 2016 | 中国海南省三亚南繁科学技术研究院 | Capsicu mannuum | MK571332 | MK589942 | MK589821 | ||||
HCcYNRL04 | 2013 | 中国云南省瑞丽市遮放农场 | Hevea brasiliensis | MK571333 | MK589943 | MK589822 | ||||
HCcYNRL05 | 2013 | 中国云南省瑞丽市遮放农场 | Hevea brasiliensis | MK571334 | MK589944 | MK589823 | ||||
HCcYNBN06 | 2013 | 中国云南省景洪市景洪农场 | Hevea brasiliensis | MK571335 | MK589945 | MK589824 | ||||
HCcHNWZS01 | 2013 | 中国海南省五指山市潘阳镇 | Hevea brasiliensis | MK571338 | MK589948 | MK589826 | ||||
VsCcHN07 | 2010 | 中国海南省三亚市三亚南繁科学技术研究院 | Hevea brasiliensis | MK571342 | MK589952 | MK589828 | ||||
HCcYNBD01 | 2013 | 中国云南省保定县市 | Hevea brasiliensis | MK571343 | MK589953 | MK589829 | ||||
HCcGDYC06 | 2013 | 中国广东省阳春市红十月农场 | Hevea brasiliensis | MK571344 | MK589954 | MK589830 | ||||
HCcHNCJ02 | 2013 | 中国海南省昌江县十月田镇 | Hevea brasiliensis | MK571349 | MK589959 | MK589833 | ||||
HCcHNQZ01 | 2013 | 中国海南省琼中县阳江农场 | Hevea brasiliensis | MK571351 | MK589961 | MK589834 | ||||
HCcHNBS03 | 2013 | 中国海南省白沙县邦溪大岭农场 | Hevea brasiliensis | MK571352 | MK589962 | MK589835 | ||||
HCcHNBS01 | 2013 | 中国海南省白沙县邦溪大岭农场 | Hevea brasiliensis | MK571353 | MK589963 | MK589836 | ||||
HCcHNTC01 | 2013 | 中国海南省屯昌县中建二队 | Hevea brasiliensis | MK571356 | MK589966 | MK589837 | ||||
HCcYNHK02 | 2013 | 中国云南省河口市蚂蝗堡农场 | Hevea brasiliensis | MK571357 | MK589967 | MK589838 | ||||
HCcHNWC01 | 2013 | 中国海南省文昌市海垦橡胶所 | Hevea brasiliensis | MK571358 | MK589968 | MK589839 | ||||
HCcHNWZS03 | 2013 | 中国海南省五指山市潘阳镇 | Hevea brasiliensis | MK571359 | MK589969 | MK589840 | ||||
HCcGDZJ04 | 2013 | 中国广东省湛江市热科院南亚所 | Hevea brasiliensis | MK571360 | MK589970 | MK589841 | ||||
HCcGDYJ1603 | 2013 | 中国广东省阳江市鸡山农场 | Hevea brasiliensis | MK571361 | MK589971 | MK589842 | ||||
HCcYNJP02 | 2013 | 中国云南省金平县 | Hevea brasiliensis | MK571362 | MK589972 | MK589843 | ||||
PaCcHB03 | 2007 | 中国河北省廊坊市 | Cucumis sativus | MK571366 | MK589976 | MK589846 | ||||
PaCcSD02 | 2007 | 中国山东省寿光市 | Cucumis sativus | MK571367 | MK589977 | MK589847 | ||||
PaCcSD03 | 2007 | 中国山东省寿光市 | Cucumis sativus | MK571368 | MK589978 | MK589848 | ||||
PaCcSD04 | 2007 | 中国山东省寿光市 | Cucumis sativus | MK571369 | MK589979 | MK589849 | ||||
HCcHNDZ1608 | 2016 | 中国海南省儋州国家种质圃 | Hevea brasiliensis | MK571371 | MK589981 | MK589850 | ||||
HCcHNDZ1615 | 2016 | 中国海南省儋州国家种质圃 | Hevea brasiliensis | MK571372 | MK589982 | MK589851 | ||||
HCcHNHK1630 | 2016 | 中国海南省海口市演丰镇 | Hevea brasiliensis | MK571374 | MK589984 | MK589852 | ||||
HCcHNHK1631 | 2016 | 中国海南省海口市演丰镇 | Hevea brasiliensis | MK571375 | MK589985 | MK589853 | ||||
HCcHNWN1633 | 2016 | 中国海南省万宁市东兴农场 | Hevea brasiliensis | MK571376 | MK589986 | MK589854 | ||||
HCcHNWN1639 | 2016 | 中国海南省万宁市东兴农场 | Hevea brasiliensis | MK571377 | MK589987 | MK589855 | ||||
HCcHNLD1648 | 2016 | 中国海南省乐东县志仲镇 | Hevea brasiliensis | MK571379 | MK589989 | MK589856 | ||||
菌株编号 Strains | 采集年 Year | 地理来源 Geographical origin | 寄主 Host | ITS登录号 GenBank | EF-1α登录号 GenBank | TUB登录号 GenBank | ||||
HCcHNLD1654 | 2016 | 中国海南省乐东县保显农场 | Hevea brasiliensis | MK571383 | MK589993 | MK589857 | ||||
HCcHNBS1679 | 2016 | 中国海南省白沙县邦溪大岭农场 | Hevea brasiliensis | MK571389 | MK589999 | MK589858 | ||||
HCcHNQZ1689 | 2016 | 中国海南省琼中县阳江农场 | Hevea brasiliensis | MK571390 | MK590000 | MK589859 | ||||
CpCcHNQZ1603 | 2016 | 中国海南省琼中县阳江农场 | Carica papaya | MK571391 | MK590001 | MK589860 | ||||
MeCcHN01 | 2007 | 中国海南省乐东县保显农场 | Hevea brasiliensis | MK571392 | MK590002 | MK589861 | ||||
LsCcHNSY1101 | 2011 | 中国海南省三亚南繁科学技术研究院 | Lactuca sativa | MK571393 | MK590003 | MK589862 | ||||
LsCcHNSY1102 | 2011 | 中国海南省三亚南繁科学技术研究院 | Lactuca sativa | MK571394 | MK590004 | MK589863 | ||||
LeCcHNSY1702 | 2011 | 中国海南省三亚南繁科学技术研究院 | Hevea brasiliensis | MK571395 | MK590005 | MK589864 | ||||
PaCcHNSY1708 | 2011 | 中国海南省三亚市天涯区 | Cucumis sativus | MK571396 | MK590006 | MK589865 | ||||
PaCcHNSY1705 | 2011 | 中国海南省三亚市涯城区 | Cucumis | MK571397 | MK590007 | MK589866 | ||||
PaCcHNSY1703 | 2011 | 中国海南省三亚市天涯区 | Cucumis | MK571398 | MK590008 | MK589867 | ||||
MeCcGD02 | 2007 | 中国广东省湛江市 | Manihot esculenta | MK571399 | MK590009 | MK589868 | ||||
HCcYN49 | 2007 | 中国云南省河口市蚂蝗堡农场 | Hevea brasiliensis | MK571401 | MK590011 | MK589870 | ||||
CpCcHNQZ1605 | 2016 | 中国海南省琼中县阳江农场 | Carica papaya | MK571402 | MK590012 | MK589871 | ||||
PaCcHNSY1711 | 2017 | 中国海南省三亚市涯城区 | Cucumis sativus | MK571404 | MK590014 | MK589872 | ||||
CmCcHN01 | 2010 | 中国海南省三亚市南繁院 | Cucumis melo | MK571326 | MK589936 | MK589874 | ||||
HCcYNHZM01-2 | 2015 | 越南 | Hevea brasiliensis | MK571405 | MK590015 | MK589873 | ||||
HCcYNHZM01-1 | 2015 | 越南 | Hevea brasiliensis | MK571363 | MK589973 | MK589844 | ||||
HCcYNHZM01-3 | 2015 | 越南 | Hevea brasiliensis | MK571364 | MK589974 | MK589845 | ||||
HCcJPZ03 | 2013 | 柬埔寨 | Hevea brasiliensis | MK571347 | MK589957 | MK589831 | ||||
HCcJPZ05 | 2013 | 柬埔寨 | Hevea brasiliensis | MK571348 | MK589958 | MK589832 | ||||
HCcJPZ04 | 2013 | 柬埔寨 | Hevea brasiliensis | MK571341 | MK589951 | MK589827 | ||||
CpCcJPZ01 | 2013 | 柬埔寨 | Carica papaya | MK571337 | MK589947 | MK589825 | ||||
HCcYD1 | 2007 | 印度 | Hevea brasiliensis | MK571293 | MK589903 | MK589808 | ||||
CYDB2 | 2007 | 印度 | Hevea brasiliensis | MK571286 | MK589896 | MK589806 | ||||
CYDB3 | 2007 | 印度 | Hevea brasiliensis | MK571370 | MK589980 | MK589869 |
Tab. 1 Information and GenBank accession numbers of the C. cassiicola isolates
菌株编号 Stains | 采集年 Year | 地理来源 Geographical origin | 寄主 Host | ITS登录号 GenBank | EF-1α登录号 GenBank | TUB登录号 GenBank | ||||
---|---|---|---|---|---|---|---|---|---|---|
HCcGX01 | 2007 | 中国广西省东兴市马路镇 | Hevea brasiliensis | MK571285 | MK589895 | MK589805 | ||||
CpCcHNDZ02 | 2007 | 中国海南省儋州市两院 | Carica papaya | MK571291 | MK589901 | MK589807 | ||||
CpCcYN02 | 2007 | 中国云南省西双版纳景洪农场 | Carica papaya | MK571295 | MK589905 | MK589809 | ||||
CpCcHN07 | 2007 | 中国海南省澄迈县红光农场 | Carica papaya | MK571297 | MK589907 | MK589810 | ||||
HCcYNMX1504 | 2013 | 中国云南省景洪市勐醒农场 | Hevea brasiliensis | MK571313 | MK589923 | MK589811 | ||||
HCcYNMX1501 | 2013 | 中国云南省景洪市勐醒农场 | Hevea brasiliensis | MK571314 | MK589924 | MK589812 | ||||
HCcYNRZS1506 | 2013 | 中国云南省景洪市热带作物研究所 | Hevea brasiliensis | MK571315 | MK589925 | MK589813 | ||||
CpCcYNMX1501 | 2013 | 中国云南省景洪市勐醒农场 | Carica papaya | MK571316 | MK589926 | MK589814 | ||||
HCcGDMM1402 | 2014 | 中国广东省化州市农垦热带作物科学研究所 | Hevea brasiliensis | MK571317 | MK589927 | MK589815 | ||||
VsCcHN10 | 2010 | 中国海南省三亚南繁科学技术研究院 | Vigna unguiculata | MK571324 | MK589934 | MK589816 | ||||
VsCcHN09 | 2010 | 中国海南省三亚南繁科学技术研究院 | Vigna unguiculata | MK571325 | MK589935 | MK589817 | ||||
CmCcHN03 | 2010 | 中国海南省三亚南繁科学技术研究院 | Cucumis melo | MK571328 | MK589938 | MK589818 | ||||
SmCcHN01 | 2010 | 中国海南省三亚南繁科学技术研究院 | Solanum melongena | MK571330 | MK589940 | MK589819 | ||||
LJCcHN01 | 2016 | 中国海南省三亚南繁科学技术研究院 | Capsicu mannuum | MK571331 | MK589941 | MK589820 | ||||
LJCcHN02 | 2016 | 中国海南省三亚南繁科学技术研究院 | Capsicu mannuum | MK571332 | MK589942 | MK589821 | ||||
HCcYNRL04 | 2013 | 中国云南省瑞丽市遮放农场 | Hevea brasiliensis | MK571333 | MK589943 | MK589822 | ||||
HCcYNRL05 | 2013 | 中国云南省瑞丽市遮放农场 | Hevea brasiliensis | MK571334 | MK589944 | MK589823 | ||||
HCcYNBN06 | 2013 | 中国云南省景洪市景洪农场 | Hevea brasiliensis | MK571335 | MK589945 | MK589824 | ||||
HCcHNWZS01 | 2013 | 中国海南省五指山市潘阳镇 | Hevea brasiliensis | MK571338 | MK589948 | MK589826 | ||||
VsCcHN07 | 2010 | 中国海南省三亚市三亚南繁科学技术研究院 | Hevea brasiliensis | MK571342 | MK589952 | MK589828 | ||||
HCcYNBD01 | 2013 | 中国云南省保定县市 | Hevea brasiliensis | MK571343 | MK589953 | MK589829 | ||||
HCcGDYC06 | 2013 | 中国广东省阳春市红十月农场 | Hevea brasiliensis | MK571344 | MK589954 | MK589830 | ||||
HCcHNCJ02 | 2013 | 中国海南省昌江县十月田镇 | Hevea brasiliensis | MK571349 | MK589959 | MK589833 | ||||
HCcHNQZ01 | 2013 | 中国海南省琼中县阳江农场 | Hevea brasiliensis | MK571351 | MK589961 | MK589834 | ||||
HCcHNBS03 | 2013 | 中国海南省白沙县邦溪大岭农场 | Hevea brasiliensis | MK571352 | MK589962 | MK589835 | ||||
HCcHNBS01 | 2013 | 中国海南省白沙县邦溪大岭农场 | Hevea brasiliensis | MK571353 | MK589963 | MK589836 | ||||
HCcHNTC01 | 2013 | 中国海南省屯昌县中建二队 | Hevea brasiliensis | MK571356 | MK589966 | MK589837 | ||||
HCcYNHK02 | 2013 | 中国云南省河口市蚂蝗堡农场 | Hevea brasiliensis | MK571357 | MK589967 | MK589838 | ||||
HCcHNWC01 | 2013 | 中国海南省文昌市海垦橡胶所 | Hevea brasiliensis | MK571358 | MK589968 | MK589839 | ||||
HCcHNWZS03 | 2013 | 中国海南省五指山市潘阳镇 | Hevea brasiliensis | MK571359 | MK589969 | MK589840 | ||||
HCcGDZJ04 | 2013 | 中国广东省湛江市热科院南亚所 | Hevea brasiliensis | MK571360 | MK589970 | MK589841 | ||||
HCcGDYJ1603 | 2013 | 中国广东省阳江市鸡山农场 | Hevea brasiliensis | MK571361 | MK589971 | MK589842 | ||||
HCcYNJP02 | 2013 | 中国云南省金平县 | Hevea brasiliensis | MK571362 | MK589972 | MK589843 | ||||
PaCcHB03 | 2007 | 中国河北省廊坊市 | Cucumis sativus | MK571366 | MK589976 | MK589846 | ||||
PaCcSD02 | 2007 | 中国山东省寿光市 | Cucumis sativus | MK571367 | MK589977 | MK589847 | ||||
PaCcSD03 | 2007 | 中国山东省寿光市 | Cucumis sativus | MK571368 | MK589978 | MK589848 | ||||
PaCcSD04 | 2007 | 中国山东省寿光市 | Cucumis sativus | MK571369 | MK589979 | MK589849 | ||||
HCcHNDZ1608 | 2016 | 中国海南省儋州国家种质圃 | Hevea brasiliensis | MK571371 | MK589981 | MK589850 | ||||
HCcHNDZ1615 | 2016 | 中国海南省儋州国家种质圃 | Hevea brasiliensis | MK571372 | MK589982 | MK589851 | ||||
HCcHNHK1630 | 2016 | 中国海南省海口市演丰镇 | Hevea brasiliensis | MK571374 | MK589984 | MK589852 | ||||
HCcHNHK1631 | 2016 | 中国海南省海口市演丰镇 | Hevea brasiliensis | MK571375 | MK589985 | MK589853 | ||||
HCcHNWN1633 | 2016 | 中国海南省万宁市东兴农场 | Hevea brasiliensis | MK571376 | MK589986 | MK589854 | ||||
HCcHNWN1639 | 2016 | 中国海南省万宁市东兴农场 | Hevea brasiliensis | MK571377 | MK589987 | MK589855 | ||||
HCcHNLD1648 | 2016 | 中国海南省乐东县志仲镇 | Hevea brasiliensis | MK571379 | MK589989 | MK589856 | ||||
菌株编号 Strains | 采集年 Year | 地理来源 Geographical origin | 寄主 Host | ITS登录号 GenBank | EF-1α登录号 GenBank | TUB登录号 GenBank | ||||
HCcHNLD1654 | 2016 | 中国海南省乐东县保显农场 | Hevea brasiliensis | MK571383 | MK589993 | MK589857 | ||||
HCcHNBS1679 | 2016 | 中国海南省白沙县邦溪大岭农场 | Hevea brasiliensis | MK571389 | MK589999 | MK589858 | ||||
HCcHNQZ1689 | 2016 | 中国海南省琼中县阳江农场 | Hevea brasiliensis | MK571390 | MK590000 | MK589859 | ||||
CpCcHNQZ1603 | 2016 | 中国海南省琼中县阳江农场 | Carica papaya | MK571391 | MK590001 | MK589860 | ||||
MeCcHN01 | 2007 | 中国海南省乐东县保显农场 | Hevea brasiliensis | MK571392 | MK590002 | MK589861 | ||||
LsCcHNSY1101 | 2011 | 中国海南省三亚南繁科学技术研究院 | Lactuca sativa | MK571393 | MK590003 | MK589862 | ||||
LsCcHNSY1102 | 2011 | 中国海南省三亚南繁科学技术研究院 | Lactuca sativa | MK571394 | MK590004 | MK589863 | ||||
LeCcHNSY1702 | 2011 | 中国海南省三亚南繁科学技术研究院 | Hevea brasiliensis | MK571395 | MK590005 | MK589864 | ||||
PaCcHNSY1708 | 2011 | 中国海南省三亚市天涯区 | Cucumis sativus | MK571396 | MK590006 | MK589865 | ||||
PaCcHNSY1705 | 2011 | 中国海南省三亚市涯城区 | Cucumis | MK571397 | MK590007 | MK589866 | ||||
PaCcHNSY1703 | 2011 | 中国海南省三亚市天涯区 | Cucumis | MK571398 | MK590008 | MK589867 | ||||
MeCcGD02 | 2007 | 中国广东省湛江市 | Manihot esculenta | MK571399 | MK590009 | MK589868 | ||||
HCcYN49 | 2007 | 中国云南省河口市蚂蝗堡农场 | Hevea brasiliensis | MK571401 | MK590011 | MK589870 | ||||
CpCcHNQZ1605 | 2016 | 中国海南省琼中县阳江农场 | Carica papaya | MK571402 | MK590012 | MK589871 | ||||
PaCcHNSY1711 | 2017 | 中国海南省三亚市涯城区 | Cucumis sativus | MK571404 | MK590014 | MK589872 | ||||
CmCcHN01 | 2010 | 中国海南省三亚市南繁院 | Cucumis melo | MK571326 | MK589936 | MK589874 | ||||
HCcYNHZM01-2 | 2015 | 越南 | Hevea brasiliensis | MK571405 | MK590015 | MK589873 | ||||
HCcYNHZM01-1 | 2015 | 越南 | Hevea brasiliensis | MK571363 | MK589973 | MK589844 | ||||
HCcYNHZM01-3 | 2015 | 越南 | Hevea brasiliensis | MK571364 | MK589974 | MK589845 | ||||
HCcJPZ03 | 2013 | 柬埔寨 | Hevea brasiliensis | MK571347 | MK589957 | MK589831 | ||||
HCcJPZ05 | 2013 | 柬埔寨 | Hevea brasiliensis | MK571348 | MK589958 | MK589832 | ||||
HCcJPZ04 | 2013 | 柬埔寨 | Hevea brasiliensis | MK571341 | MK589951 | MK589827 | ||||
CpCcJPZ01 | 2013 | 柬埔寨 | Carica papaya | MK571337 | MK589947 | MK589825 | ||||
HCcYD1 | 2007 | 印度 | Hevea brasiliensis | MK571293 | MK589903 | MK589808 | ||||
CYDB2 | 2007 | 印度 | Hevea brasiliensis | MK571286 | MK589896 | MK589806 | ||||
CYDB3 | 2007 | 印度 | Hevea brasiliensis | MK571370 | MK589980 | MK589869 |
基因 Genes | 引物 Primers | 序列(5'-3') Sequence (5'-3') | 退火温度 Annealing temperature/℃ | 文献来源 Reference |
---|---|---|---|---|
ITS | ITS1 ITS4 | TCCGTAGGTGAACCTGCGG TCCTCCGCTTATTGATATGC | 53 | Shimomoto等[ |
EF-1α | EF1-728F EF1-986R | CATCGAGAAGTTCGAGAAGG TACTTGAAGGAACCCTTACC | 53 | Shimomoto等[ |
TUB | Tub-F Tub-R | CCTCCAAACCGGTCAATG CTGGGTCAACTCGGGGAC | 56 | Shimomoto等[ |
Cas5 | Cas5-F Cas5-R | CGGGGAGGTATCAGGTGTGAGATA CAGAACAAGCCAAAAGAGAACTAC | 57 | Déon等[ |
Cas2 | Cas2-F Cas2-R | GGATTTGCCTGAGATCCTA CAAACAATGCTAACCAAACAAAC | 53 | Déon等[ |
Tab. 2 Polygenic sequence primers
基因 Genes | 引物 Primers | 序列(5'-3') Sequence (5'-3') | 退火温度 Annealing temperature/℃ | 文献来源 Reference |
---|---|---|---|---|
ITS | ITS1 ITS4 | TCCGTAGGTGAACCTGCGG TCCTCCGCTTATTGATATGC | 53 | Shimomoto等[ |
EF-1α | EF1-728F EF1-986R | CATCGAGAAGTTCGAGAAGG TACTTGAAGGAACCCTTACC | 53 | Shimomoto等[ |
TUB | Tub-F Tub-R | CCTCCAAACCGGTCAATG CTGGGTCAACTCGGGGAC | 56 | Shimomoto等[ |
Cas5 | Cas5-F Cas5-R | CGGGGAGGTATCAGGTGTGAGATA CAGAACAAGCCAAAAGAGAACTAC | 57 | Déon等[ |
Cas2 | Cas2-F Cas2-R | GGATTTGCCTGAGATCCTA CAAACAATGCTAACCAAACAAAC | 53 | Déon等[ |
菌株编号 Isolate code | 寄主 Host | 采集地点 Geographic location | 分离年份 Collection year | 致病型 Phylogenetic clade | 毒素类型 Cassiicolin isoforms | 病情指数Disease index | ||||
---|---|---|---|---|---|---|---|---|---|---|
橡胶 Rubber | 辣椒 Pepper | 黄瓜 Cucumber | 豇豆 Cowpea | 番茄 Tomato | ||||||
HCcYN15 | 橡胶 | 中国云南版纳 | 2007 | A1 | Cas5 | 27.7 | 0 | 0 | 0 | 0 |
HCcGX01 | 橡胶 | 中国广西东兴 | 2007 | A1 | Cas5 | 19.4 | 0 | 0 | 0 | 0 |
HCcYNBN06 | 橡胶 | 中国云南版纳 | 2013 | A1 | Cas5 | 34.6 | 0 | 0 | 0 | 0 |
HCcHNBS03 | 橡胶 | 中国海南白沙 | 2013 | A1 | Cas5 | 25.1 | 0 | 0 | 0 | 0 |
HCcYNHK02 | 橡胶 | 中国云南河口 | 2013 | A1 | Cas5 | 31.0 | 0 | 0 | 0 | 0 |
HCcYNRL04 | 橡胶 | 中国云南瑞丽 | 2013 | A1 | Cas5 | 18.3 | 0 | 0 | 0 | 0 |
HCcGDYC06 | 橡胶 | 中国广东阳春 | 2013 | A1 | Cas5 | 17.2 | 0 | 0 | 0 | 0 |
菌株编号 Isolate code | 寄主 Host | 采集地点 Geographic location | 分离年份 Collection year | 致病型 Phylogenetic clade | 毒素类型 Cassiicolin isoforms | 病情指数Disease index | ||||
橡胶 Rubber | 辣椒 Pepper | 黄瓜 Cucumber | 豇豆 Cowpea | 番茄 Tomato | ||||||
HCcGDZJ04 | 橡胶 | 中国广东湛江 | 2013 | A1 | Cas5 | 20.1 | 0 | 0 | 0 | 0 |
HCcJPZ03 | 橡胶 | 柬埔寨 | 2013 | A1 | Cas5 | 30.2 | 0 | 0 | 0 | 0 |
HCcHNDZ1619 | 橡胶 | 中国海南儋州 | 2016 | A1 | Cas5 | 40.5 | 0 | 0 | 0 | 0 |
HCcHNLD1654 | 橡胶 | 中国海南乐东 | 2016 | A1 | Cas5 | 42.7 | 0 | 0 | 0 | 0 |
HCcHNQZ1689 | 橡胶 | 中国海南琼中 | 2016 | A1 | Cas5 | 13.2 | 0 | 0 | 0 | 0 |
CYDB3 | 橡胶 | 印度 | 2007 | B1 | Cas2 | 20.3 | 11.2 | 26.8 | 0 | 0 |
HCcGDMM1402 | 橡胶 | 中国广东茂名 | 2014 | B4 | Cas2 | 33.5 | 36.8 | 39.0 | 27.1 | 9.2 |
HCcYNHZM01-3 | 橡胶 | 越南 | 2014 | A2 | Cas2 | 19.0 | 23.7 | 15.5 | 7.2 | 16.3 |
CmCcHN03 | 西甜瓜 | 中国海南三亚 | 2010 | B2 | Cas2 | 23.3 | 15.3 | 17.2 | 21.9 | 18.6 |
CmCcHN01 | 西甜瓜 | 中国海南三亚 | 2010 | B2 | Cas2 | 16.8 | 27.1 | 34.6 | 38.9 | 19.5 |
VsCcHN07 | 豇豆 | 中国海南三亚 | 2010 | B2 | Cas2 | 6.5 | 12.4 | 30.7 | 39.2 | 20.1 |
VsCcHN09 | 豇豆 | 中国海南三亚 | 2010 | B2 | Cas2 | 16.9 | 28.6 | 34.1 | 40.3 | 19.8 |
SmCcHN01 | 茄子 | 中国海南三亚 | 2010 | B2 | Cas2 | 14.2 | 7.0 | 0 | 6.9 | 0 |
MeCcGD02 | 木薯 | 中国广东湛江 | 2007 | B3 | Cas2 | 15.8 | 27.4 | 32.8 | 37.1 | 19.2 |
CpCcHNQZ1603 | 番木瓜 | 中国海南琼中 | 2016 | B1 | Cas5 | 19.9 | 9.1 | 25.7 | 0 | 0 |
CpCcYNMX1501 | 番木瓜 | 中国云南版纳 | 2015 | B1 | Cas5 | 21.8 | 11.4 | 26.1 | 0 | 0 |
LeCcHNSY1702 | 番茄 | 中国海南海口 | 2017 | A2 | Cas2 | 21.5 | 37.9 | 14.3 | 6.3 | 18.2 |
LJCcHN01 | 辣椒 | 中国海南海口 | 2016 | A2 | Cas2 | 18.7 | 38.8 | 16.2 | 6.9 | 17.7 |
PaCcSD04 | 黄瓜 | 中国山东寿光 | 2007 | B4 | Cas2 | 34.2 | 36.6 | 44.3 | 25.5 | 8.8 |
PaCcHB03 | 黄瓜 | 中国河北廊坊 | 2007 | B4 | Cas2 | 33.6 | 37.7 | 43.9 | 26.8 | 9.3 |
Tab. 3 Pathogenicity of C. cassiicola isolates derived from different hosts
菌株编号 Isolate code | 寄主 Host | 采集地点 Geographic location | 分离年份 Collection year | 致病型 Phylogenetic clade | 毒素类型 Cassiicolin isoforms | 病情指数Disease index | ||||
---|---|---|---|---|---|---|---|---|---|---|
橡胶 Rubber | 辣椒 Pepper | 黄瓜 Cucumber | 豇豆 Cowpea | 番茄 Tomato | ||||||
HCcYN15 | 橡胶 | 中国云南版纳 | 2007 | A1 | Cas5 | 27.7 | 0 | 0 | 0 | 0 |
HCcGX01 | 橡胶 | 中国广西东兴 | 2007 | A1 | Cas5 | 19.4 | 0 | 0 | 0 | 0 |
HCcYNBN06 | 橡胶 | 中国云南版纳 | 2013 | A1 | Cas5 | 34.6 | 0 | 0 | 0 | 0 |
HCcHNBS03 | 橡胶 | 中国海南白沙 | 2013 | A1 | Cas5 | 25.1 | 0 | 0 | 0 | 0 |
HCcYNHK02 | 橡胶 | 中国云南河口 | 2013 | A1 | Cas5 | 31.0 | 0 | 0 | 0 | 0 |
HCcYNRL04 | 橡胶 | 中国云南瑞丽 | 2013 | A1 | Cas5 | 18.3 | 0 | 0 | 0 | 0 |
HCcGDYC06 | 橡胶 | 中国广东阳春 | 2013 | A1 | Cas5 | 17.2 | 0 | 0 | 0 | 0 |
菌株编号 Isolate code | 寄主 Host | 采集地点 Geographic location | 分离年份 Collection year | 致病型 Phylogenetic clade | 毒素类型 Cassiicolin isoforms | 病情指数Disease index | ||||
橡胶 Rubber | 辣椒 Pepper | 黄瓜 Cucumber | 豇豆 Cowpea | 番茄 Tomato | ||||||
HCcGDZJ04 | 橡胶 | 中国广东湛江 | 2013 | A1 | Cas5 | 20.1 | 0 | 0 | 0 | 0 |
HCcJPZ03 | 橡胶 | 柬埔寨 | 2013 | A1 | Cas5 | 30.2 | 0 | 0 | 0 | 0 |
HCcHNDZ1619 | 橡胶 | 中国海南儋州 | 2016 | A1 | Cas5 | 40.5 | 0 | 0 | 0 | 0 |
HCcHNLD1654 | 橡胶 | 中国海南乐东 | 2016 | A1 | Cas5 | 42.7 | 0 | 0 | 0 | 0 |
HCcHNQZ1689 | 橡胶 | 中国海南琼中 | 2016 | A1 | Cas5 | 13.2 | 0 | 0 | 0 | 0 |
CYDB3 | 橡胶 | 印度 | 2007 | B1 | Cas2 | 20.3 | 11.2 | 26.8 | 0 | 0 |
HCcGDMM1402 | 橡胶 | 中国广东茂名 | 2014 | B4 | Cas2 | 33.5 | 36.8 | 39.0 | 27.1 | 9.2 |
HCcYNHZM01-3 | 橡胶 | 越南 | 2014 | A2 | Cas2 | 19.0 | 23.7 | 15.5 | 7.2 | 16.3 |
CmCcHN03 | 西甜瓜 | 中国海南三亚 | 2010 | B2 | Cas2 | 23.3 | 15.3 | 17.2 | 21.9 | 18.6 |
CmCcHN01 | 西甜瓜 | 中国海南三亚 | 2010 | B2 | Cas2 | 16.8 | 27.1 | 34.6 | 38.9 | 19.5 |
VsCcHN07 | 豇豆 | 中国海南三亚 | 2010 | B2 | Cas2 | 6.5 | 12.4 | 30.7 | 39.2 | 20.1 |
VsCcHN09 | 豇豆 | 中国海南三亚 | 2010 | B2 | Cas2 | 16.9 | 28.6 | 34.1 | 40.3 | 19.8 |
SmCcHN01 | 茄子 | 中国海南三亚 | 2010 | B2 | Cas2 | 14.2 | 7.0 | 0 | 6.9 | 0 |
MeCcGD02 | 木薯 | 中国广东湛江 | 2007 | B3 | Cas2 | 15.8 | 27.4 | 32.8 | 37.1 | 19.2 |
CpCcHNQZ1603 | 番木瓜 | 中国海南琼中 | 2016 | B1 | Cas5 | 19.9 | 9.1 | 25.7 | 0 | 0 |
CpCcYNMX1501 | 番木瓜 | 中国云南版纳 | 2015 | B1 | Cas5 | 21.8 | 11.4 | 26.1 | 0 | 0 |
LeCcHNSY1702 | 番茄 | 中国海南海口 | 2017 | A2 | Cas2 | 21.5 | 37.9 | 14.3 | 6.3 | 18.2 |
LJCcHN01 | 辣椒 | 中国海南海口 | 2016 | A2 | Cas2 | 18.7 | 38.8 | 16.2 | 6.9 | 17.7 |
PaCcSD04 | 黄瓜 | 中国山东寿光 | 2007 | B4 | Cas2 | 34.2 | 36.6 | 44.3 | 25.5 | 8.8 |
PaCcHB03 | 黄瓜 | 中国河北廊坊 | 2007 | B4 | Cas2 | 33.6 | 37.7 | 43.9 | 26.8 | 9.3 |
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