Research Progresses of Tropical Plant Genome

doi:10.3969/j.issn.1000-2561.2019.10.001

Abstract

Abstract:

Based on genome-wide sequencing results, the development of genome-wide sequencing of 13 tropical plants including banana (Musa spp.), longan (Dimocarpus longan), papaya (Carica papaya), pineapple (Ananas comosus), coconut (Cocos nucifera), durian (Durio zibethinus), rubber (Hevea brasiliensis), cassava (Manihot esculenta), date palm (Phoenix dactylifera), cocoa (Theobroma cacao), oil palm(Elaeis guineensis), coffee (Coffea canephra) Tiepi-shihu (Dendrobium officinale) was discussed, and the tropical plant genome research was summarized.

Key words: tropical plants, whole genome, next generation sequencing, genetic breeding, functional genes

LI Dan,CHEN Xiaohui,LAI Zhongxiong. Research Progresses of Tropical Plant Genome[J]. Chinese Journal of Tropical Crops, 2019, 40(10): 1875-1888.

Figures/Tables 2

References 70

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项目 Items	香蕉Banana			龙眼 Longan	番木瓜 Papaya	橡胶 Rubber	枣椰 Date palm	可可 Cocoa	咖啡 Coffee	油棕 Oil palm	铁皮石斛 Tiepi-shihu
项目 Items	A	B	阿宽蕉	龙眼 Longan	番木瓜 Papaya	橡胶 Rubber	枣椰 Date palm	可可 Cocoa	咖啡 Coffee	油棕 Oil palm	铁皮石斛 Tiepi-shihu
NBS	117	93	62	122	17	350	69	53	169	82	83
NBS-LRR	89	69	51	258	23	47	16	104	63	145	47
CC-NBS-LRR	27	—	—	150	4	45	19	82	79	20	13
CC-NBS	30	34	20	37	2	134	40	46	239	10	14
TIR-NBS	0	0	0	4	2	17	0	4	1	3	—
TIR-NBS-LRR	0	—	—	23	6	25	0	8	3	4	—
Total	—	—	—	932	54	618	179	491	—	566	—
参考文献 Reference	[7]	[8]	[10]	[11]	[5]	[17]	[22]	[6]	[25]	[24]	[28]

项目 Items	香蕉Banana			龙眼 Longan	番木瓜 Papaya	橡胶 Rubber	枣椰 Date palm	可可 Cocoa	咖啡 Coffee	油棕 Oil palm	铁皮石斛 Tiepi-shihu
项目 Items	A	B	阿宽蕉	龙眼 Longan	番木瓜 Papaya	橡胶 Rubber	枣椰 Date palm	可可 Cocoa	咖啡 Coffee	油棕 Oil palm	铁皮石斛 Tiepi-shihu
NBS	117	93	62	122	17	350	69	53	169	82	83
NBS-LRR	89	69	51	258	23	47	16	104	63	145	47
CC-NBS-LRR	27	—	—	150	4	45	19	82	79	20	13
CC-NBS	30	34	20	37	2	134	40	46	239	10	14
TIR-NBS	0	0	0	4	2	17	0	4	1	3	—
TIR-NBS-LRR	0	—	—	23	6	25	0	8	3	4	—
Total	—	—	—	932	54	618	179	491	—	566	—
参考文献 Reference	[7]	[8]	[10]	[11]	[5]	[17]	[22]	[6]	[25]	[24]	[28]