Chinese Journal of Tropical Crops ›› 2019, Vol. 40 ›› Issue (1): 87-91.DOI: 10.3969/j.issn.1000-2561.2019.01.013
• Biotechnology and Tissue Culture • Previous Articles Next Articles
LIU Rong,GONG Deyong,LIU Qingguo,HUANG Hai,FAN Jianxin()
Received:
2018-05-23
Revised:
2018-08-23
Online:
2019-01-15
Published:
2019-01-15
Contact:
FAN Jianxin
LIU Rong,GONG Deyong,LIU Qingguo,HUANG Hai,FAN Jianxin. Genetic Diversity Analysis of Thirteen Mango Germplasm Resources Based on SRAP Molecular Markers[J]. Chinese Journal of Tropical Crops, 2019, 40(1): 87-91.
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编号Number | 种质资源Germplasm resource | 基本特征Basic characteristic |
---|---|---|
1 | 串芒 | 象牙芒22号芽变单株,引种于广西,多胚,适应性强,中熟品种 |
2 | 桂热芒10号 | 中大型果,多胚,抗寒性强,后期果实易感炭疽病 |
3 | 红芒6号 | 皮薄果软,易感炭疽病,抗寒性强 |
4 | Mi-5 | 贵州野生种质资源,抗寒性强 |
5 | 台农1号 | 早熟品种,抗炭疽病强,耐贮运 |
6 | Mi-6 | 贵州野生种质资源,抗寒性强 |
7 | 红象牙芒 | 引种于广西,单胚 |
8 | 攀西红芒 | 引种于四川,多胚,中熟品种,适应性强 |
9 | 桂热芒82号 | 引种于广西,单胚,晚熟品种 |
10 | 凯特芒 | 原产于美国,单胚 |
11 | 金煌芒 | 台湾自育品种,多胚,中熟品种 |
12 | Mi-8 | 桂热芒82号实生单株,中大型果,抗寒性强,晚熟品种 |
13 | Mi-9 | 红象牙芒实生单株,中小型果,抗寒能力强,中晚熟品种 |
Tab. 1 The basic characteristics of different varieties (or lines)
编号Number | 种质资源Germplasm resource | 基本特征Basic characteristic |
---|---|---|
1 | 串芒 | 象牙芒22号芽变单株,引种于广西,多胚,适应性强,中熟品种 |
2 | 桂热芒10号 | 中大型果,多胚,抗寒性强,后期果实易感炭疽病 |
3 | 红芒6号 | 皮薄果软,易感炭疽病,抗寒性强 |
4 | Mi-5 | 贵州野生种质资源,抗寒性强 |
5 | 台农1号 | 早熟品种,抗炭疽病强,耐贮运 |
6 | Mi-6 | 贵州野生种质资源,抗寒性强 |
7 | 红象牙芒 | 引种于广西,单胚 |
8 | 攀西红芒 | 引种于四川,多胚,中熟品种,适应性强 |
9 | 桂热芒82号 | 引种于广西,单胚,晚熟品种 |
10 | 凯特芒 | 原产于美国,单胚 |
11 | 金煌芒 | 台湾自育品种,多胚,中熟品种 |
12 | Mi-8 | 桂热芒82号实生单株,中大型果,抗寒性强,晚熟品种 |
13 | Mi-9 | 红象牙芒实生单株,中小型果,抗寒能力强,中晚熟品种 |
正向引物 Forward primer (5′-3′) | 反向引物 Reverse primer (5′-3′) |
---|---|
ME1: TGAGTCCAAACCGGATA | EM1: GACTGCGTACGAATTAAT |
ME2: TGAGTCCAAACCGGAGC | EM2: GACTGCGTACGAATTTGC |
ME3: TGAGTCCAAACCGGAAT | EM3: GACTGCGTACGAATTGAC |
ME4: TGAGTCCAAACCGGACC | EM4: GACTGCGTACGAATTTGA |
ME5: TGAGTCCAAACCGGAAG | EM5: GACTGCGTACGAATTAAC |
ME6: TGAGTCCAAACCGGTAG | EM6: GACTGCGTACGAATTGCA |
ME7: TGAGTCCAAACCGGTAA | EM7: GACTGCGTACGAATTATG |
ME8: TGAGTCCAAACCGGTGC | EM8: GACTGCGTACGAATTAGC |
ME9: TGAGTCCAAACCGGTCC | EM9: GACTGCGTACGAATTACG |
EM10: GACTGCGTACGAATTCAG | |
EM11: GACTGCGTACGAATTCTG | |
EM12: GACTGCGTACGAATTCCA |
Tab. 2 Primers used in SRAP molecular markers
正向引物 Forward primer (5′-3′) | 反向引物 Reverse primer (5′-3′) |
---|---|
ME1: TGAGTCCAAACCGGATA | EM1: GACTGCGTACGAATTAAT |
ME2: TGAGTCCAAACCGGAGC | EM2: GACTGCGTACGAATTTGC |
ME3: TGAGTCCAAACCGGAAT | EM3: GACTGCGTACGAATTGAC |
ME4: TGAGTCCAAACCGGACC | EM4: GACTGCGTACGAATTTGA |
ME5: TGAGTCCAAACCGGAAG | EM5: GACTGCGTACGAATTAAC |
ME6: TGAGTCCAAACCGGTAG | EM6: GACTGCGTACGAATTGCA |
ME7: TGAGTCCAAACCGGTAA | EM7: GACTGCGTACGAATTATG |
ME8: TGAGTCCAAACCGGTGC | EM8: GACTGCGTACGAATTAGC |
ME9: TGAGTCCAAACCGGTCC | EM9: GACTGCGTACGAATTACG |
EM10: GACTGCGTACGAATTCAG | |
EM11: GACTGCGTACGAATTCTG | |
EM12: GACTGCGTACGAATTCCA |
引物组合 Primer pair | 扩增总条带数 Total number of bands | 多态性带数 Number of polymorphic bands | 多态性比率 Rate of polymorphic bands/% |
---|---|---|---|
ME1-EM6 | 12 | 11 | 91.67 |
ME1-EM11 | 8 | 8 | 100.00 |
ME2-EM1 | 6 | 5 | 83.33 |
ME2-EM10 | 7 | 4 | 57.14 |
ME3-EM3 | 5 | 3 | 60.00 |
ME3-EM10 | 10 | 8 | 80.00 |
ME4-EM2 | 8 | 8 | 100.00 |
ME4-EM3 | 9 | 9 | 100.00 |
ME4-EM4 | 13 | 11 | 84.62 |
ME4-EM5 | 18 | 18 | 100.00 |
ME5-EM3 | 10 | 6 | 60.00 |
ME5-EM6 | 7 | 6 | 85.71 |
ME5-EM7 | 9 | 7 | 77.78 |
ME5-EM9 | 11 | 8 | 72.73 |
ME6-EM3 | 8 | 5 | 62.50 |
ME7-EM6 | 12 | 10 | 83.33 |
ME7-EM8 | 8 | 6 | 75.00 |
Tab. 3 Polymorphism for the amplification patterns of mango varieties using 17 SRAP primer pairs
引物组合 Primer pair | 扩增总条带数 Total number of bands | 多态性带数 Number of polymorphic bands | 多态性比率 Rate of polymorphic bands/% |
---|---|---|---|
ME1-EM6 | 12 | 11 | 91.67 |
ME1-EM11 | 8 | 8 | 100.00 |
ME2-EM1 | 6 | 5 | 83.33 |
ME2-EM10 | 7 | 4 | 57.14 |
ME3-EM3 | 5 | 3 | 60.00 |
ME3-EM10 | 10 | 8 | 80.00 |
ME4-EM2 | 8 | 8 | 100.00 |
ME4-EM3 | 9 | 9 | 100.00 |
ME4-EM4 | 13 | 11 | 84.62 |
ME4-EM5 | 18 | 18 | 100.00 |
ME5-EM3 | 10 | 6 | 60.00 |
ME5-EM6 | 7 | 6 | 85.71 |
ME5-EM7 | 9 | 7 | 77.78 |
ME5-EM9 | 11 | 8 | 72.73 |
ME6-EM3 | 8 | 5 | 62.50 |
ME7-EM6 | 12 | 10 | 83.33 |
ME7-EM8 | 8 | 6 | 75.00 |
样品Sample | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 1.000 | ||||||||||||
2 | 0.795 | 1.000 | |||||||||||
3 | 0.708 | 0.714 | 1.000 | ||||||||||
4 | 0.752 | 0.783 | 0.720 | 1.000 | |||||||||
5 | 0.677 | 0.658 | 0.646 | 0.652 | 1.000 | ||||||||
6 | 0.752 | 0.708 | 0.658 | 0.739 | 0.665 | 1.000 | |||||||
7 | 0.764 | 0.696 | 0.696 | 0.652 | 0.689 | 0.702 | 1.000 | ||||||
8 | 0.752 | 0.820 | 0.683 | 0.714 | 0.727 | 0.714 | 0.689 | 1.000 | |||||
9 | 0.714 | 0.720 | 0.621 | 0.739 | 0.615 | 0.714 | 0.602 | 0.764 | 1.000 | ||||
10 | 0.665 | 0.720 | 0.696 | 0.702 | 0.652 | 0.727 | 0.665 | 0.702 | 0.689 | 1.000 | |||
11 | 0.745 | 0.764 | 0.702 | 0.671 | 0.658 | 0.733 | 0.708 | 0.720 | 0.696 | 0.783 | 1.000 | ||
12 | 0.665 | 0.696 | 0.634 | 0.702 | 0.640 | 0.739 | 0.652 | 0.702 | 0.776 | 0.652 | 0.696 | 1.000 | |
13 | 0.658 | 0.702 | 0.752 | 0.658 | 0.646 | 0.621 | 0.708 | 0.708 | 0.621 | 0.758 | 0.739 | 0.658 | 1.000 |
Tab. 4 The variance range of genetic similarity coefficients of 13 mango varieties
样品Sample | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 1.000 | ||||||||||||
2 | 0.795 | 1.000 | |||||||||||
3 | 0.708 | 0.714 | 1.000 | ||||||||||
4 | 0.752 | 0.783 | 0.720 | 1.000 | |||||||||
5 | 0.677 | 0.658 | 0.646 | 0.652 | 1.000 | ||||||||
6 | 0.752 | 0.708 | 0.658 | 0.739 | 0.665 | 1.000 | |||||||
7 | 0.764 | 0.696 | 0.696 | 0.652 | 0.689 | 0.702 | 1.000 | ||||||
8 | 0.752 | 0.820 | 0.683 | 0.714 | 0.727 | 0.714 | 0.689 | 1.000 | |||||
9 | 0.714 | 0.720 | 0.621 | 0.739 | 0.615 | 0.714 | 0.602 | 0.764 | 1.000 | ||||
10 | 0.665 | 0.720 | 0.696 | 0.702 | 0.652 | 0.727 | 0.665 | 0.702 | 0.689 | 1.000 | |||
11 | 0.745 | 0.764 | 0.702 | 0.671 | 0.658 | 0.733 | 0.708 | 0.720 | 0.696 | 0.783 | 1.000 | ||
12 | 0.665 | 0.696 | 0.634 | 0.702 | 0.640 | 0.739 | 0.652 | 0.702 | 0.776 | 0.652 | 0.696 | 1.000 | |
13 | 0.658 | 0.702 | 0.752 | 0.658 | 0.646 | 0.621 | 0.708 | 0.708 | 0.621 | 0.758 | 0.739 | 0.658 | 1.000 |
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